Generate a LaTeX summary table split into three panels by data availability

Produces a single booktabs-style LaTeX table with the same columns as generate_results_table(), but with pathogens divided into three labelled panels (A, B, C) separated by horizontal rules and bold panel-label header rows.

Usage

generate_results_table_split(
  all_results,
  group_a = c("SARS", "COVID_19", "Measles", "Mpox"),
  group_b = c("Nipah", "EVD", "MERS", "Cholera", "CCHF", "Dengue", "YFV"),
  group_c = c("MVD", "Lassa", "Zika", "RVF"),
  panel_labels = c("A", "B", "C"),
  model_weights = NULL,
  show_subgroups = TRUE,
  rhat_threshold = 1.05,
  ci_prob = 0.95,
  pathogen_labels = NULL,
  caption = paste0("Incubation period estimates by pathogen. ",
    "Values are posterior medians with 95\\% credible intervals (CI). ",
    "Pathogens are grouped by data availability: panel A (substantial data), ",
    "panel B (moderate data), and panel C (limited data). ",
    "Subgroup analyses are shown in italics beneath each pathogen."),
  label = "tab:incubation_periods"
)

Arguments

all_results

Nested list produced by analysis/main_analysis.R.

group_a

Character vector of pathogen keys for panel A (high data).

group_b

Character vector of pathogen keys for panel B (moderate data).

group_c

Character vector of pathogen keys for panel C (low data).

panel_labels

Length-3 character vector of panel labels (default c("A", "B", "C")).

model_weights

Pre-computed output from compute_pathogen_model_bayes_factors(). Computed once internally if NULL.

show_subgroups

Logical. Include subgroup sub-rows (default TRUE).

rhat_threshold

Numeric. Maximum acceptable Rhat (default 1.05).

ci_prob

Numeric. Width of the credible interval (default 0.95).

pathogen_labels

Optional named character vector overriding display names.

caption

LaTeX \caption{} string.

label

LaTeX \label{} string.

Value

A single character string containing the complete LaTeX table environment.

See also

generate_results_table(), plot_main_figure_split()